BDGP6

Version: 2023-04-26

Category: igenomes

Description

Usage

To find and load available datasets:

$ module avail
$ module load datasets
$ module load igenomes/BDGP6/2023-04-26

Environment Variables

Variable Name

Value

BDGP6_fasta

/anvil/datasets/igenomes/Drosophila_melanogaster/Ensembl/BDGP6/Sequence/WholeGenomeFasta/genome.fa

BDGP6_bwa

/anvil/datasets/igenomes/Drosophila_melanogaster/Ensembl/BDGP6/Sequence/BWAIndex/version0.6.0/

BDGP6_bowtie2

/anvil/datasets/igenomes/Drosophila_melanogaster/Ensembl/BDGP6/Sequence/Bowtie2Index/

BDGP6_star

/anvil/datasets/igenomes/Drosophila_melanogaster/Ensembl/BDGP6/Sequence/STARIndex/

BDGP6_bismark

/anvil/datasets/igenomes/Drosophila_melanogaster/Ensembl/BDGP6/Sequence/BismarkIndex/

BDGP6_gtf

/anvil/datasets/igenomes/Drosophila_melanogaster/Ensembl/BDGP6/Annotation/Genes/genes.gtf

BDGP6_bed12

/anvil/datasets/igenomes/Drosophila_melanogaster/Ensembl/BDGP6/Annotation/Genes/genes.bed

BDGP6_mito_name

M

BDGP6_macs_gsize

1.2e8

BDGP6_HOME

/anvil/datasets/igenomes/Drosophila_melanogaster/Ensembl/BDGP6

RCAC_BDGP6_ROOT

/anvil/datasets/igenomes/Drosophila_melanogaster/Ensembl/BDGP6

RCAC_BDGP6_VERSION

2023-04-26