=======
R64-1-1
=======

Version: 2023-04-26

Category: **igenomes**

Description
-----------



Usage
-----

To find and load available datasets::

    $ module avail
    $ module load datasets
    $ module load igenomes/R64-1-1/2023-04-26
Environment Variables
-------------------

.. list-table::
   :header-rows: 1
   :widths: 25 75

   * - **Variable Name**
     - **Value**
   * - ``R6411_fasta``
     - ``/anvil/datasets/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Sequence/WholeGenomeFasta/genome.fa``
   * - ``R6411_bwa``
     - ``/anvil/datasets/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Sequence/BWAIndex/version0.6.0/``
   * - ``R6411_bowtie2``
     - ``/anvil/datasets/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Sequence/Bowtie2Index/``
   * - ``R6411_star``
     - ``/anvil/datasets/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Sequence/STARIndex/``
   * - ``R6411_bismark``
     - ``/anvil/datasets/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Sequence/BismarkIndex/``
   * - ``R6411_gtf``
     - ``/anvil/datasets/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Annotation/Genes/genes.gtf``
   * - ``R6411_bed12``
     - ``/anvil/datasets/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1/Annotation/Genes/genes.bed``
   * - ``R6411_mito_name``
     - ``MT``
   * - ``R6411_macs_gsize``
     - ``1.2e7``
   * - ``R64-1-1_HOME``
     - ``/anvil/datasets/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1``
   * - ``RCAC_R64-1-1_ROOT``
     - ``/anvil/datasets/igenomes/Saccharomyces_cerevisiae/Ensembl/R64-1-1``
   * - ``RCAC_R64-1-1_VERSION``
     - ``2023-04-26``